DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of ovary, C1140680

Disease: Malignant neoplasm of breast

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs953038635	SOD2	0.590	0.800	6	159692720	missense variant	G/A;T	snv	8.0E-06		51
rs920778	HOTAIR	0.633	0.480	12	53966448	intron variant	G/A	snv		0.57	36
rs886039920	BRCA1	0.807	0.160	17	43115755	frameshift variant	ACAGG/-	delins			7
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv			213
rs874945		0.732	0.240	12	53961667	upstream gene variant	C/T	snv		0.38	14
rs869312774	PALB2	0.925	0.160	16	23614019	frameshift variant	T/-	delins			3
rs861539	KLC1 ; XRCC3	0.519	0.680	14	103699416	missense variant	G/A	snv	0.29	0.30	104
rs851797	EXO1	0.752	0.240	1	241889740	3 prime UTR variant	A/G	snv		0.72	13
rs8170	BABAM1 ; USHBP1	0.724	0.160	19	17278895	synonymous variant	G/A	snv	0.15	0.18	13
rs80359078	BRCA2	0.882	0.160	13	32370430	missense variant	G/A	snv	3.2E-05	2.1E-05	3
rs80358981	BRCA2	0.827	0.200	13	32356550	stop gained	C/T	snv	2.0E-05	1.4E-05	7
rs80358721	BRCA2	0.724	0.320	13	32339320	stop gained	C/A;G;R	snv	4.2E-06		14
rs80357796	BRCA1	0.752	0.240	17	43094464	frameshift variant	T/-	del			11
rs80357750	BRCA1	0.790	0.200	17	43115759	frameshift variant	G/-	delins			8
rs80357474	BRCA1	0.827	0.200	17	43049188	missense variant	A/C;G;T	snv	8.0E-06		5
rs80357438	NBR2 ; BRCA1	0.851	0.200	17	43124032	stop gained	A/G;T	snv			5
rs80357138	BRCA1	0.763	0.200	17	43094776	missense variant	C/T	snv	8.0E-06		9
rs80356952	BRCA1	0.790	0.200	17	43093901	stop gained	G/A	snv			9
rs80356898	BRCA1	0.752	0.200	17	43093844	stop gained	G/A;C	snv	2.8E-05; 4.0E-06		11
rs80356897	BRCA1	0.827	0.160	17	43099853	missense variant	A/G	snv			5
rs786203319	BRCA1	0.827	0.160	17	43115759	missense variant	G/A	snv			6
rs764918809	MDM2	0.827	0.160	12	68839337	missense variant	T/C	snv	4.0E-06		6
rs752742313	PIK3CB	0.637	0.320	3	138655502	missense variant	C/T	snv	1.2E-05		36
rs750042441	PGR ; PGR-AS1	0.827	0.160	11	101128367	missense variant	G/A;C	snv	6.1E-05; 4.3E-06		5
rs748876625	BRCA1	0.807	0.160	17	43104122	missense variant	C/A;G	snv	1.2E-05		10